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分享一篇发在Nature Biotechnology上的研究,全文使用大量heatmap,多达十几张,可以学习一番,为自己的CNS吸取美学灵感!
fig1,c, Editing pattern and PreS scores of the five top-performing agRNAs at the endogenous DNMT1 locus using plasmid-based delivery in HEK293T cells (mean of n = 3 independent replicates).
fig1,d, 下侧 NGS plots show the five most frequent edited alleles, with the green-highlighted row indicating the desired allele harboring only the intended A-to-G edit without bystander substitutions (mean of n = 3 independent replicates).
fig2,c, Editing pattern of top enriched ABE-SpRY variants isolated during the PANCE experiment. PreS reflects on-target editing versus bystander editing efficiency (mean of n = 3 independent replicates).
fig2,d,同fig1,d,
fig3,b, Editing efficiencies at the humanDNMT1for ABE ML-predicted single amino acid exchange mutants tested with sgRNACtrl and agRNA56114 in HEK293T cells. c, PreS score of tested variants. Red highlighted residues denote reversions to the wild-type TadA amino acid.
fig3,d、f、j,
fig4,d, Abundance plots display the four most frequent edited alleles, with the green-highlighted row indicating the desired allele containing only the intended A-to-G edit and no bystander substitutions (mean of n = 3 independent replicates).
来源:Perrotta, R.M., Vinke, S., Ferreira, R. et al. Engineered base editors with reduced bystander editing through directed evolution. Nat Biotechnol (2025). https://doi.org/10.1038/s41587-025-02937-w
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